Revision 2

#95830Store at -20C

1 Kit

(4 x 20 microliters)

Cell Signaling Technology

Orders: 877-616-CELL (2355) [email protected]

Support: 877-678-TECH (8324)

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For Research Use Only. Not for Use in Diagnostic Procedures.
Product Includes Product # Quantity Mol. Wt Isotype/Source
ATRX (D1N2E) Rabbit mAb 14820 20 µl 280 kDa Rabbit IgG
Daxx (25C12) Rabbit mAb 4533 20 µl 110 kDa Rabbit IgG
Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb 13969 20 µl 17 kDa Rabbit IgG
Histone H3 (D1H2) XP® Rabbit mAb 4499 20 µl 17 kDa Rabbit IgG
Anti-rabbit IgG, HRP-linked Antibody 7074 100 µl Goat 

Please visit cellsignal.com for individual component applications, species cross-reactivity, dilutions, protocols, and additional product information.

Description

The ATRX/Daxx Antibody Sampler Kit provides an economical means of detecting ATRX and Daxx as well as related histone marks using antibodies. The kit includes enough antibodies to perform two western blot experiments with each primary antibody.

Storage

Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA, 50% glycerol and less than 0.02% sodium azide. Store at –20°C. Do not aliquot the antibodies.

Background

α-thalassemia/mental retardation X-linked (ATRX) is a transcriptional regulator and helicase that belongs to the SNF2 family of chromatin remodeling proteins (1,2). Together with its binding partner death-associated protein 6 (Daxx), ATRX acts as histone chaperone to deposit histone variant H3.3 at repetitive DNA sequences such as telomeric, pericentric, and ribosomal gene repeats (3-6). ATRX is involved in many nuclear functions that ensure proper sister chromatid cohesion during mitosis and chromosome alignment during meiosis (7,8). The ATRX transcriptional regulator also plays a role in the maintenance of telomere integrity and the regulation of gene expression during mammalian development by influencing DNA methylation patterns at high DNA repeat sequences (9,10). Mutations in the corresponding ATRX gene results in ATR-X syndrome, an X-linked disorder characterized by intellectual disabilities, craniofacial abnormalities, and mild α-thalassemia (11,12). Research studies indicate that the loss of ATRX protein occurs in numerous cancers, including pancreatic neuroendocrine tumors (PanNETs) and pediatric glioblastoma, where telomere maintenance occurs independently of telomerase (13-16).
Daxx is a ubiquitously expressed protein that was originally identified through a yeast two-hybrid screen as an interactor with the cytoplasmic domain of Fas. It was found to enhance Fas-mediated apoptosis and activate the JNK pathway (17). However, additional studies have revealed that Daxx is actually a nuclear protein localizing to promyelocytic leukemia oncogenic domains (PODs) (18,19). Nuclear interactions have since been observed with CENP-C (20), Pax3 (22), DNA methyltransferase I (21) and chromatin-associated proteins, including histone deacetylase II, H2A, H2B, H3, H4, and Dek. Roles for Daxx have been suggested in transcriptional repression and cell cycle control. Loss of Daxx in mice leads to embryonic lethality with extensive developmental apoptosis, suggesting a role for Daxx directly or indirectly in suppressing cell death (22). Furthermore, inhibition of Daxx expression using RNAi has confirmed Daxx to be anti-apoptotic and to repress transcriptional activity of targets, including NF-κB and E2F-1 (23).

  1. Clynes, D. et al. (2013) Trends Biochem Sci 38, 461-6.
  2. Picketts, D.J. et al. (1996) Hum Mol Genet 5, 1899-907.
  3. Drané, P. et al. (2010) Genes Dev 24, 1253-65.
  4. Elsässer, S.J. et al. (2012) Nature 491, 560-5.
  5. Lewis, P.W. et al. (2010) Proc Natl Acad Sci U S A 107, 14075-80.
  6. Goldberg, A.D. et al. (2010) Cell 140, 678-91.
  7. Ritchie, K. et al. (2008) J Cell Biol 180, 315-24.
  8. De La Fuente, R. et al. (2004) Dev Biol 272, 1-14.
  9. Wong, L.H. et al. (2010) Genome Res 20, 351-60.
  10. Gibbons, R.J. et al. (2000) Nat Genet 24, 368-71.
  11. Gibbons, R.J. et al. (1995) Cell 80, 837-45.
  12. Gibbons, R.J. et al. (1995) Hum Mol Genet 4 Spec No, 1705-9.
  13. Heaphy, C.M. et al. (2011) Science 333, 425.
  14. Lovejoy, C.A. et al. (2012) PLoS Genet 8, e1002772.
  15. Schwartzentruber, J. et al. (2012) Nature 482, 226-31.
  16. Jiao, Y. et al. (2011) Science 331, 1199-203.
  17. Yang, X. et al. (1997) Cell 89, 1067-76.
  18. Torii, S. et al. (1999) EMBO J 18, 6037-49.
  19. Li, H. et al. (2000) Mol Cell Biol 20, 1784-96.
  20. Pluta, A.F. et al. (1998) J Cell Sci 111 (Pt 14), 2029-41.
  21. Michaelson, J.S. et al. (1999) Genes Dev 13, 1918-23.
  22. Hollenbach, A.D. et al. (1999) EMBO J 18, 3702-11.
  23. Suihko, M.L. and Stackebrandt, E. (2003) J Appl Microbiol 94, 25-34.

Background References

    Trademarks and Patents

    Cell Signaling Technology is a trademark of Cell Signaling Technology, Inc.
    XP is a registered trademark of Cell Signaling Technology, Inc.
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    Revision 2
    #95830

    ATRX/Daxx Antibody Sampler Kit

    ATRX/Daxx Antibody Sampler Kit: Image 1 Expand Image
    Western blot analysis of extracts from various cell lines using Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 2 Expand Image
    Western blot analysis of extracts from various cell lines using ATRX (D1N2E) Rabbit mAb (upper) and Nucleolin (D4C7O) Rabbit mAb #14574. As expected, the signal for ATRX is not present in the negative cell line U2OS.
    ATRX/Daxx Antibody Sampler Kit: Image 3 Expand Image
    Western blot analysis of extracts from various cell lines using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 4 Expand Image
    Immunohistochemical analysis of paraffin-embedded human breast carcinoma using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 5 Expand Image
    Western blot analysis of extracts from K562 (human), A20 (mouse) and PC12 (rat) cell lines using Daxx (25C12) Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 6 Expand Image
    After the primary antibody is bound to the target protein, a complex with HRP-linked secondary antibody is formed. The LumiGLO® is added and emits light during enzyme catalyzed decomposition.
    ATRX/Daxx Antibody Sampler Kit: Image 7 Expand Image
    Antibody specificity was determined by western blotting. HeLa and NIH/3T3 cell lysates were probed with Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb (Panel A) or Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb pre-adsorbed with 1.5 μM of various competitor peptides (panels B-M). As shown, only the tri-methyl histone H3 (Lys9) peptide (panel E) competed away binding of the antibody.
    ATRX/Daxx Antibody Sampler Kit: Image 8 Expand Image
    Immunoprecipitation of ATRX from 293T cell extracts using Rabbit (DA1E) mAb IgG XP® Isotype Control #3900 (lane 2) or ATRX (D1N2E) Rabbit mAb (lane 3). Lane 1 is 10% input. Western blot analysis was performed using ATRX (D1N2E) Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 9 Expand Image
    Immunohistochemical analysis of paraffin-embedded 4T1 syngeneic mammary tumor using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 10 Expand Image
    Confocal immunofluorescent analysis of HeLa cells using Daxx (25C12) Rabbit mAb (green). Actin filaments have been labeled with Alexa Fluor® 555 phalloidin (red).
    ATRX/Daxx Antibody Sampler Kit: Image 11 Expand Image
    Confocal immunofluorescent analysis of interphase (left) or mitotic (right) HeLa cells, untreated (upper) or λ phosphatase-treated (lower), using Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb (green) and β-Actin (8H10D10) Mouse mAb #3700 (red). Blue pseudocolor = DRAQ5® #4084 (fluorescent DNA dye). As shown, this antibody does not detect tri-methyl histone H3 Lys9 in mitotic cells when the adjacent Ser10 residue is phosphorylated.
    ATRX/Daxx Antibody Sampler Kit: Image 12 Expand Image
    Chromatin immunoprecipitations were performed with cross-linked chromatin from HeLa cells and either ATRX (D1N2E) Rabbit mAb or Normal Rabbit IgG #2729, using SimpleChIP® Enzymatic Chromatin IP Kit (Magnetic Beads) #9003. The enriched DNA was quantified by real-time PCR using human 18s rDNA repeat primers, SimpleChIP® Human 28s rDNA Repeat Primers #14901, and SimpleChIP® Human GAPDH Exon 1 Primers #5516. The amount of immunoprecipitated DNA in each sample is represented as signal relative to the total amount of input chromatin, which is equivalent to one.
    ATRX/Daxx Antibody Sampler Kit: Image 13 Expand Image
    Confocal immunofluorescent analysis of HeLa cells using Histone H3 (D1H2) XP® Rabbit mAb (green) and β-Tubulin (9F3) Rabbit mAb (Alexa Fluor® 555 Conjugate) #2116 (red).
    ATRX/Daxx Antibody Sampler Kit: Image 14 Expand Image
    Immunohistochemical analysis of paraffin-embedded LL/2 syngeneic tumor using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 15 Expand Image
    Flow cytometric analysis of HeLa cells using Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb (solid line) compared to concentration-matched Rabbit (DA1E) mAb IgG XP® Isotype Control #3900 (dashed line). Anti-rabbit IgG (H+L), F(ab')2 Fragment (Alexa Fluor® 488 Conjugate) #4412 was used as a secondary antibody.
    ATRX/Daxx Antibody Sampler Kit: Image 16 Expand Image
    Flow cytometric analysis of HeLa cells using Histone H3 (D1H2) XP® Rabbit mAb (solid line) or a concentration-matched Rabbit (DA1E) mAb IgG XP® Isotype Control #3900 (dashed line). Anti-rabbit IgG (H+L), F(ab')2 Fragment (Alexa Fluor® 488 Conjugate) #4412 was used as a secondary antibody.
    ATRX/Daxx Antibody Sampler Kit: Image 17 Expand Image
    Immunohistochemical analysis of paraffin-embedded mouse brain using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 18 Expand Image
    Immunohistochemical analysis of paraffin-embedded rhesus monkey liver using Histone H3 (D1H2) XP® Rabbit mAb.
    ATRX/Daxx Antibody Sampler Kit: Image 19 Expand Image
    Chromatin immunoprecipitations were performed with cross-linked chromatin from HeLa cells and either Tri-Methyl-Histone H3 (Lys9) (D4W1U) Rabbit mAb or Normal Rabbit IgG #2729 using SimpleChIP® Enzymatic Chromatin IP Kit (Magnetic Beads) #9003. The enriched DNA was quantified by real-time PCR using SimpleChIP® Human GAPDH Exon 1 Primers #5516, SimpleChIP® Human AFM Intron 1 Primers #5098, SimpleChIP® Human MYT-1 Exon 1 Primers #4493, and SimpleChIP® Human α Satellite Repeat Primers #4486. The amount of immunoprecipitated DNA in each sample is represented as signal relative to the total amount of input chromatin, which is equivalent to one.