Revision 2

#70751Store at -20C

1 Kit

(8 x 20 microliters)

Cell Signaling Technology

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For Research Use Only. Not for Use in Diagnostic Procedures.
Product Includes Product # Quantity Mol. Wt Isotype/Source
PI3 Kinase Class III (D9A5) Rabbit mAb 4263 20 µl 100 kDa Rabbit 
PIK3R4 Antibody 14580 20 µl 153 kDa Rabbit 
Beclin-1 (D40C5) Rabbit mAb 3495 20 µl 60 kDa Rabbit IgG
Atg14 Antibody 5504 20 µl 65 kDa Rabbit 
UVRAG (D2Q1Z) Rabbit mAb 13115 20 µl 90 kDa Rabbit IgG
Rubicon (D9F7) Rabbit mAb 8465 20 µl 130 kDa Rabbit IgG
Bif-1 Antibody 4467 20 µl 42 kDa Rabbit 
Atg9A (D4O9D) Rabbit mAb 13509 20 µl 100-110 kDa Rabbit IgG
Anti-rabbit IgG, HRP-linked Antibody 7074 100 µl Goat 

Please visit cellsignal.com for individual component applications, species cross-reactivity, dilutions, protocols, and additional product information.

Description

The Autophagy Vesicle Nucleation Antibody Sampler Kit provides an economical means of detecting target proteins involved in autophagosome formation and maturation. The kit contains enough antibody to perform two western blot experiments per primary antibody.

Storage

Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA, 50% glycerol and less than 0.02% sodium azide. Store at –20°C. Do not aliquot the antibodies.

Background

Autophagy is a catabolic process for the autophagosomic-lysosomal degradation of bulk cytoplasmic contents (1,2). Autophagy is generally activated by conditions of nutrient deprivation but is also associated with a number of physiological processes including development, differentiation, neurodegeneration, infection and cancer (3). The molecular machinery of autophagy was largely discovered in yeast and is directed by a number of autophagy-related (Atg) genes. These proteins are involved in the formation of autophagosomes, cytoplasmic vacuoles that are delivered to lysosomes for degradation. The PIK3R4/PI3K class III complex interacts with Beclin-1 to play a role during several stages of autophagy. Autophagosome formation is stimulated when Atg14 complexes with PIK3R4, PI3K class III, and Beclin-1. The UVRAG protein competes with Atg14 for Beclin-1 binding, forming a mutually exclusive complex with PIK3R4, PI3K class III, and Beclin-1 that regulates autophagosome maturation. Autophagosome maturation is impaired in the presence of the Beclin-1-binding protein Rubicon (4,5). Co-expression of PIK3R4 is required for PI3K class III activation and regulation by both Beclin-1/UVRAG and nutrient levels (6). Bif-1 directly binds to UVRAG, forming a complex with Beclin-1, resulting in increased PI3-kinase class III/Vps34 activity required for autophagosome maturation (7). Inhibition of GSK-3β, as seen during nutrient deprivation, results in increased expression of Bif-1, and can contribute to autophagic cell death (8). Atg9A is an integral membrane protein that is required for both the initiation and the expansion of the autophagosome (9,10). Recruitment of Atg9A to the autophagosomal membrane is dynamic and transient as Atg9A also cycles between autophagy-related structures known as omegasomes, the trans-Golgi network (TGN), and endosomes, and at no point becomes a stable component of the autophagosomal membrane (9,11). The precise regulation of Atg9A trafficking is not fully clarified, yet it is suggested to involve p38 mitogen-activated protein kinase (MAPK)-binding protein p38IP and the Beclin-1-binding protein Bif-1 (12,13).

  1. Reggiori, F. and Klionsky, D.J. (2002) Eukaryot Cell 1, 11-21.
  2. Codogno, P. and Meijer, A.J. (2005) Cell Death Differ 12 Suppl 2, 1509-18.
  3. Levine, B. and Yuan, J. (2005) J Clin Invest 115, 2679-88.
  4. Zhong, Y. et al. (2009) Nat Cell Biol 11, 468-76.
  5. Sun, Q. et al. (2008) Proc Natl Acad Sci U S A 105, 19211-6.
  6. Yan, Y. et al. (2009) Biochem J 417, 747-55.
  7. Takahashi, Y. et al. (2007) Nat Cell Biol 9, 1142-51.
  8. Yang, J. et al. (2010) J Cell Sci 123, 861-70.
  9. Young, A.R. et al. (2006) J Cell Sci 119, 3888-900.
  10. Yamada, T. et al. (2005) J Biol Chem 280, 18283-90.
  11. Orsi, A. et al. (2012) Mol Biol Cell 23, 1860-73.
  12. Webber, J.L. and Tooze, S.A. (2010) EMBO J 29, 27-40.

Background References

    Trademarks and Patents

    Cell Signaling Technology is a trademark of Cell Signaling Technology, Inc.
    KARPAS cell line source: Dr. Abraham Karpas at the University of Cambridge.
    All other trademarks are the property of their respective owners. Visit cellsignal.com/trademarks for more information.

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    Revision 2
    #70751

    Autophagy Vesicle Nucleation Antibody Sampler Kit

    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 1 Expand Image
    Western blot analysis of extracts from various cell lines using UVRAG (D2Q1Z) Rabbit mAb (upper) or β-Actin (D6A8) Rabbit mAb #8457 (lower). HCT 116 cells have been reported to contain a monoallelic frameshift mutation resulting in significantly reduced levels of endogenous UVRAG expression (11).
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 2 Expand Image
    Western blot analysis of extracts of various cell lines using Atg9A (D4O9D) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 3 Expand Image
    Western blot analysis of extracts from various cell lines using PIK3R4 Antibody.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 4 Expand Image
    Western blot analysis of extracts from various cell lines using Beclin-1 (D40C5) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 5 Expand Image
    Western blot analysis of extracts from mouse brain and C6 cells using PI3 Kinase Class III (D9A5) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 6 Expand Image
    Western blot analysis of extracts from various cell lines using Bif-1 Antibody.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 7 Expand Image
    Western blot analysis of extracts from HeLa cells, transfected with 100 nM SignalSilence® Control siRNA (Unconjugated) #6568 (-), SignalSilence® Atg14 siRNA I #6286 (+) or SignalSilence® Atg14 siRNA II #6287 (+), using Atg14 Antibody #5504 (upper) or β-Tubulin (9F3) Rabbit mAb #2128 (lower). The Atg14 Antibody confirms silencing of Atg14 expression, while the β-Tubulin (9F3) Rabbit mAb is used as a loading control.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 8 Expand Image
    After the primary antibody is bound to the target protein, a complex with HRP-linked secondary antibody is formed. The LumiGLO® is added and emits light during enzyme catalyzed decomposition.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 9 Expand Image
    Western blot analysis of extracts from various cell lines using Rubicon (D9F7) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 10 Expand Image
    Western blot analysis of extracts from 293T cells, mock transfected (-) or transfected with a construct expressing human UVRAG (hUVRAG; +), using UVRAG (D2Q1Z) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 11 Expand Image
    Western blot analysis of extracts from RD cells, transfected with 100 nM SignalSilence® Control siRNA (Unconjugated) #6568 (-) or SignalSilence® Atg9A siRNA I #7051 (+), using Atg9A (D4O9D) Rabbit mAb (upper) or β-Actin (D6A8) Rabbit mAb #8457 (lower). The Atg9A (D4O9D) Rabbit mAb confirms silencing of Atg9A expression while the β-Actin (D6A8) Rabbit mAb is used as a loading control.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 12 Expand Image
    Western blot analysis of extracts from HeLa cells, transfected with 100 nM SignalSilence® Control siRNA (Unconjugated) #6568 (-), SignalSilence® Beclin-1 siRNA I #6222 (+) or SignalSilence® Beclin-1 siRNA II (+), using Beclin-1 (D40C5) XP® Rabbit mAb #3495 (upper) or α-Tubulin (11H10) Rabbit mAb #2125 (lower). The Beclin-1 (D40C5) XP® Rabbit mAb confirms silencing of Beclin-1 expression, while the α-Tubulin (11H10) Rabbit mAb is used to control for loading and specificity of Beclin-1 siRNA.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 13 Expand Image
    Western blot analysis of extract from various cell lines using Atg14 Antibody.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 14 Expand Image
    Western blot analysis of extracts from 293T cells, mock transfected (-) or transfected with human Rubicon (hRubicon, +), using Rubicon (D9F7) Rabbit mAb. Rubicon construct was kindly provided by Dr. Qing Zhong, University of California, Berkeley, CA.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 15 Expand Image
    Immunoprecipitation of UVRAG from PANC-1 cell extracts using Rabbit (DA1E) mAb IgG XP® Isotype Control #3900 (lane 2) or UVRAG (D2Q1Z) Rabbit mAb (lane 3). Lane 1 is 10% input. Western blot analysis was performed using UVRAG (D2Q1Z) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 16 Expand Image
    Immunoprecipitation of Atg9A from Hep G2 cell extracts using Rabbit (DA1E) mAb IgG XP® Isotype control #3900 (lane 2) or Atg9A (D4O9D) Rabbit mAb (lane 3). Lane 1 is 10% input. Western blot analysis was performed using Atg9A (D4O9D) Rabbit mAb.
    Autophagy Vesicle Nucleation Antibody Sampler Kit: Image 17 Expand Image
    Western blot analysis of extracts from 293T cells, mock transfected (-) or transfected with a GFP-Atg14 construct (+), using Atg14 Antibody. GFP-Atg14 construct was kindly provided by Dr. Qing Zhong, University of California, Berkeley CA.