Revision 1
Cell Signaling Technology

Orders: 877-616-CELL (2355) [email protected]

Support: 877-678-TECH (8324)

Web: [email protected] cellsignal.com

3 Trask LaneDanversMassachusetts01923USA
For Research Use Only. Not for Use in Diagnostic Procedures.
Applications:

WB, ChIP

REACTIVITY:

H M R Mk

SENSITIVITY:

Endogenous

MW (kDa):

17

Source/Isotype:

Rabbit IgG

UniProt ID:

#P68431

Entrez-Gene Id:

8350

Product Information

Product Usage Information

For optimal ChIP results, use 10 μL of antibody and 10 μg of chromatin (approximately 4 × 106 cells) per IP. This antibody has been validated using SimpleChIP® Enzymatic Chromatin IP Kits.
Application Dilution
Western Blotting 1:1000
Chromatin IP 1:50

Storage

Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/mL BSA, 50% glycerol, and less than 0.02% sodium azide. Store at –20°C. Do not aliquot the antibody.

Specificity / Sensitivity

Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb recognizes endogenous levels of total histone H3 protein only when butyrylated or crotonylated on Lys9. This antibody shows some cross-reactivity with histone H3 that is crotonylated on Lys27. This antibody does not cross-react with non-crotonylated, acetylated, or propionylated histone H3 Lys9.

Species Reactivity:

Human, Mouse, Rat, Monkey

Source / Purification

Monoclonal antibody is produced by immunizing animals with a synthetic peptide corresponding to the amino terminus of histone H3 in which Lys9 is crotonylated.

Background

The nucleosome, made up of four core histone proteins (H2A, H2B, H3, and H4), is the primary building block of chromatin. Originally thought to function as a static scaffold for DNA packaging, histones have now been shown to be dynamic proteins, undergoing multiple types of post-translational modifications, including acetylation, phosphorylation, methylation, and ubiquitination (1,2). Histone crotonylation is an evolutionarily conserved process that is correlated with the amount of available cellular crotonyl-CoA. The addition of crotonyl groups is facilitated by CBP, p300, as well as the conserved MOF enzyme (3,4). Crotonylation is generally found at actively transcribed gene promoters, and has been uniquely implicated in male germ cell gene expression (3,5). While structurally similar to acetyl groups, crotonyl groups are not read by bromodomains, and are instead read by YEATS and DPF domains (6-8). Key chromatin regulators have been shown to have great affinity to crotonyl marks, including MYST3 and DPF2, a member of the BAF chromatin remodeling complex (9). Much like acetylation, crotonylation is dynamically regulated, and class I deacetylases HDAC1/2/3 have been shown to be capable of decrotonylation (10,11). Furthermore, crotonylation can be negatively regulated by CDYL, which can convert crotonyl-CoA to β-hydroxybutyryl-CoA (12). Crotonylation has been linked to metabolic state, as limited energy sources cause a global reduction in H3K9 acetylation and an increase in H3K9 crotonylation (13). While crotonylation is generally found at active genes, H3K27cr is recognized by GAS41 along with the SIN3A-HDAC1 corepressive complex and is associated with a gene repression program distinct from H3K27 trimethylation (14).

  1. Peterson, C.L. and Laniel, M.A. (2004) Curr Biol 14, R546-51.
  2. Jaskelioff, M. and Peterson, C.L. (2003) Nat Cell Biol 5, 395-9.
  3. Tan, M. et al. (2011) Cell 146, 1016-28.
  4. Liu, X. et al. (2017) Cell Discov 3, 17016.
  5. Montellier, E. et al. (2012) Bioessays 34, 187-93.
  6. Li, Y. et al. (2016) Mol Cell 62, 181-193.
  7. Andrews, F.H. et al. (2016) Nat Chem Biol 12, 396-8.
  8. Zhao, D. et al. (2016) Cell Res 26, 629-32.
  9. Xiong, X. et al. (2016) Nat Chem Biol 12, 1111-1118.
  10. Wei, W. et al. (2017) Cell Res 27, 898-915.
  11. Kelly, R.D.W. et al. (2018) Sci Rep 8, 14690.
  12. Liu, S. et al. (2017) Mol Cell 67, 853-866.e5.
  13. Gowans, G.J. et al. (2019) Mol Cell 76, 909-921.e3.
  14. Liu, N. et al. (2023) Mol Cell 83, 2206-2221.e11.

Species Reactivity

Species reactivity is determined by testing in at least one approved application (e.g., western blot).

Western Blot Buffer

IMPORTANT: For western blots, incubate membrane with diluted primary antibody in 5% w/v BSA, 1X TBS, 0.1% Tween® 20 at 4°C with gentle shaking, overnight.

Applications Key

WB: Western Blotting ChIP: Chromatin IP

Cross-Reactivity Key

H: human M: mouse R: rat Hm: hamster Mk: monkey Vir: virus Mi: mink C: chicken Dm: D. melanogaster X: Xenopus Z: zebrafish B: bovine Dg: dog Pg: pig Sc: S. cerevisiae Ce: C. elegans Hr: horse GP: Guinea Pig Rab: rabbit All: all species expected

Trademarks and Patents

Cell Signaling Technology is a trademark of Cell Signaling Technology, Inc.
All other trademarks are the property of their respective owners. Visit cellsignal.com/trademarks for more information.

Limited Uses

Except as otherwise expressly agreed in a writing signed by a legally authorized representative of CST, the following terms apply to Products provided by CST, its affiliates or its distributors. Any Customer's terms and conditions that are in addition to, or different from, those contained herein, unless separately accepted in writing by a legally authorized representative of CST, are rejected and are of no force or effect.

Products are labeled with For Research Use Only or a similar labeling statement and have not been approved, cleared, or licensed by the FDA or other regulatory foreign or domestic entity, for any purpose. Customer shall not use any Product for any diagnostic or therapeutic purpose, or otherwise in any manner that conflicts with its labeling statement. Products sold or licensed by CST are provided for Customer as the end-user and solely for research and development uses. Any use of Product for diagnostic, prophylactic or therapeutic purposes, or any purchase of Product for resale (alone or as a component) or other commercial purpose, requires a separate license from CST. Customer shall (a) not sell, license, loan, donate or otherwise transfer or make available any Product to any third party, whether alone or in combination with other materials, or use the Products to manufacture any commercial products, (b) not copy, modify, reverse engineer, decompile, disassemble or otherwise attempt to discover the underlying structure or technology of the Products, or use the Products for the purpose of developing any products or services that would compete with CST products or services, (c) not alter or remove from the Products any trademarks, trade names, logos, patent or copyright notices or markings, (d) use the Products solely in accordance with CST Product Terms of Sale and any applicable documentation, and (e) comply with any license, terms of service or similar agreement with respect to any third party products or services used by Customer in connection with the Products.

Revision 1
#36934

Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb

Western Blotting Image 1: Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb Expand Image
Western blot analysis of extracts from various cell lines using Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb (upper) or Histone H3 (D1H2) XP® Rabbit mAb #4499 (lower).
Chromatin Immunoprecipitation Image 1: Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb Expand Image
Chromatin immunoprecipitations were performed with cross-linked chromatin from HeLa cells and either Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb or Normal Rabbit IgG #2729, using SimpleChIP® Plus Enzymatic Chromatin IP Kit (Magnetic Beads) #9005. The enriched DNA was quantified by real-time PCR, using human GAPDH exon 1 primers, SimpleChIP® Human RPL30 Exon 3 Primers #7014, SimpleChIP® Human MyoD1 Exon 1 Primers #4490, and SimpleChIP® Human α Satellite Repeat Primers #4486. The amount of immunoprecipitated DNA in each sample is represented as signal relative to the total amount of input chromatin, which is equivalent to one.
Product Image 1: Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb Expand Image
Butyryl/Crotonyl-Histone H3 (Lys9) (E9N8C) Rabbit mAb specificity was determined by peptide ELISA. The graph depicts the binding of the antibody to pre-coated crotonyl histone H3 (Lys9) peptide in the presence of increasing concentrations of various competitor peptides. As shown, the butyryl and crotonyl histone H3 (Lys9) peptides completely competed away the antibody and there was partial competition with the crotonyl histone H3 (Lys27) peptide.