Revision 1

#4888Store at -20C

1 Kit

(8 x 20 microliters)

Cell Signaling Technology

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For Research Use Only. Not for Use in Diagnostic Procedures.
Product Includes Product # Quantity Mol. Wt Isotype/Source
Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb 2697 20 µl 85 IKK-alpha 87 IKK-beta kDa Rabbit IgG
IKKα (3G12) Mouse mAb 11930 20 µl 85 kDa Mouse IgG1
Phospho-NF-κB2 p100 (Ser866/870) Antibody 4810 20 µl 110 kDa Rabbit 
NF-κB2 p100/p52 Antibody 4882 20 µl 52 (mature). 120 (precursor). kDa Rabbit 
NIK Antibody 4994 20 µl 125 kDa Rabbit 
RelB (C1E4) Rabbit mAb 4922 20 µl 70 kDa Rabbit IgG
TRAF2 Antibody 4712 20 µl 53 kDa Rabbit 
TRAF3 Antibody 4729 20 µl 62 kDa Rabbit 
Anti-rabbit IgG, HRP-linked Antibody 7074 100 µl Goat 
Anti-mouse IgG, HRP-linked Antibody 7076 100 µl Horse 

Please visit cellsignal.com for individual component applications, species cross-reactivity, dilutions, protocols, and additional product information.

Description

This kit contains reagents to examine the activation state and total protein levels of key components in the noncanonical NF-κB pathway: TRAF2, TRAF3, NIK, IKKα, p100, and RelB.

Storage

Supplied in 10 mM sodium HEPES (pH 7.5), 150 mM NaCl, 100 µg/ml BSA, 50% glycerol and less than 0.02% sodium azide. Store at –20°C. Do not aliquot the antibody.

Background

Transcription factors of the nuclear factor κB (NF-κB)/Rel family play a pivotal role in inflammatory and immune responses (1,2). There are five family members in mammals: RelA, RelB, c-Rel, NF-κB1 (p105/p50) and NF-κB2 (p100/p52). Both p105 and p100 are proteolytically processed by the proteasome to produce p50 and p52, respectively. The p50 and p52 products form dimeric complexes with Rel proteins. While p50 associates with many of the NF-κB family members, p52 tends to form dimers primarily with RelB. A plethora of stimuli such TNFα and LPS induce the canonical NF-κB pathway, characterized by the activation of the classical IκB Kinase (IKK) complex (containing IKKα, IKKβ, IKKγ, and ELKS), which then phosphorylates inhibitory IκB molecules, targeting them for rapid degradation through a ubiquitin-proteasome pathway (3).

The noncanonical pathway, triggered by BAFF, CD40L, and certain other stimuli, is based on the inducible phosphorylation and proteasome-mediated partial degradation of NF-κB2 p100 to p52, a process regulated by the NF-κB Inducing Kinase (NIK) and IKKα, but not IKKβ or IKKγ (4-6). NIK phosphorylates IKKα at Ser176/180 (6) and p100 at Ser866/870, then recruits IKKα to p100 where IKKα phosphorylates additional residues in the N- and C-terminus (8), leading to the ubiquitination and processing of p100 (9). The TNF Receptor Associated Factor molecules TRAF2 and TRAF3 have been shown to be negative regulators of the noncanonical pathway (10, 11), and their differential binding to receptors may also play a role in determining whether transduced signals activate the canonical pathway, noncanonical pathway, or both (12). TRAF3 promotes the rapid turnover of NIK in resting cells, and its activation-induced degradation is a key regulatory point in the pathway (13). This pathway is required for B cell maturation and activation, proper architecture of peripheral lymphoid tissue, and safeguards against autoimmunity (14).

  1. Baeuerle, P.A. and Henkel, T. (1994) Annu Rev Immunol 12, 141-79.
  2. Baeuerle, P.A. and Baltimore, D. (1996) Cell 87, 13-20.
  3. Ghosh, S. and Karin, M. (2002) Cell 109 Suppl, S81-96.
  4. Xiao, G. et al. (2001) Mol Cell 7, 401-9.
  5. Senftleben, U. et al. (2001) Science 293, 1495-9.
  6. Xiao, G. et al. (2001) EMBO J 20, 6805-15.
  7. Ling, L. et al. (1998) Proc Natl Acad Sci USA 95, 3792-7.
  8. Xiao, G. et al. (2004) J Biol Chem 279, 30099-105.
  9. Liang, C. et al. (2006) Cell Signal 18, 1309-17.
  10. Xia, Z.P. and Chen, Z.J. (2005) Sci STKE 2005, pe7.
  11. Liao, G. et al. (2004) J Biol Chem 279, 26243-50.
  12. Morrison, M.D. et al. (2005) J Biol Chem 280, 10018-24.
  13. Qing, G. et al. (2005) J Biol Chem 280, 40578-82.
  14. Xiao, G. et al. (2006) Cytokine Growth Factor Rev 17, 281-93.

Background References

    Trademarks and Patents

    Cell Signaling Technology is a trademark of Cell Signaling Technology, Inc.
    All other trademarks are the property of their respective owners. Visit cellsignal.com/trademarks for more information.

    Limited Uses

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    Products are labeled with For Research Use Only or a similar labeling statement and have not been approved, cleared, or licensed by the FDA or other regulatory foreign or domestic entity, for any purpose. Customer shall not use any Product for any diagnostic or therapeutic purpose, or otherwise in any manner that conflicts with its labeling statement. Products sold or licensed by CST are provided for Customer as the end-user and solely for research and development uses. Any use of Product for diagnostic, prophylactic or therapeutic purposes, or any purchase of Product for resale (alone or as a component) or other commercial purpose, requires a separate license from CST. Customer shall (a) not sell, license, loan, donate or otherwise transfer or make available any Product to any third party, whether alone or in combination with other materials, or use the Products to manufacture any commercial products, (b) not copy, modify, reverse engineer, decompile, disassemble or otherwise attempt to discover the underlying structure or technology of the Products, or use the Products for the purpose of developing any products or services that would compete with CST products or services, (c) not alter or remove from the Products any trademarks, trade names, logos, patent or copyright notices or markings, (d) use the Products solely in accordance with CST Product Terms of Sale and any applicable documentation, and (e) comply with any license, terms of service or similar agreement with respect to any third party products or services used by Customer in connection with the Products.

    Revision 1
    #4888

    NF-κB Non-Canonical Pathway Antibody Sampler Kit

    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 1 Expand Image
    Western blot analysis of extracts from various cell lines using IKKα (3G12) Mouse mAb (upper) or β-Actin (D6A8) Rabbit mAb #8457 (lower).
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 2 Expand Image
    Western blot analysis of extracts from THP-1 cells, differentiated with TPA (#9905, 80 nM for 24h) and treated with 1 μg/ml LPS for the indicated times, using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 3 Expand Image
    Western blot analysis of extracts from THP1 and Ramos cells, using TRAF2 Antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 4 Expand Image
    Western blot analysis of extracts from COS-7 cells, untransfected (-) or transfected with human TRAF3 construct (+) using TRAF3 Antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 5 Expand Image
    Western blot analysis of extracts from HeLa cells transfected with wild-type or mutant NF-κB2 p100 (SS866/870AA) and with or without NIK, using Phospho-NF-κB2 p100 (Ser866/870) Antibody or total NF-κB2 p100 Antibody #4882. The p100 constructs were generously provided by Dr. Warner Greene of the Gladstone Institute of Virology and Immunology, Dr. Shao-Cong Sun of The Pennsylvania State University College of Medicine, and Dr. Gutian Xiao of Rutgers, The State University of New Jersey.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 6 Expand Image
    Western blot analysis of extracts from THP-1, L929, C6, and COS cells, using NF-kappaB2 p100 Antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 7 Expand Image
    Western blot analysis of extracts from Raji, THP-1 and BaF3 cells using RelB (C1E4) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 8 Expand Image
    CUT&RUN was performed with HDLM-2 cells and RelB (C1E4) Rabbit mAb, using CUT&RUN Assay Kit #86652. DNA Library was prepared using DNA Library Prep Kit for Illumina® (ChIP-seq, CUT&RUN) #56795. The figure shows binding across BIRC3 gene.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 9 Expand Image
    Western blot analysis of extracts from various cell lines, untreated or treated with 10uM MG132, using NIK Antibody #4994.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 10 Expand Image
    After the primary antibody is bound to the target protein, a complex with HRP-linked secondary antibody is formed. The LumiGLO® is added and emits light during enzyme catalyzed decomposition.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 11 Expand Image
    After the primary antibody is bound to the target protein, a complex with HRP-linked secondary antibody is formed. The LumiGLO* is added and emits light during enzyme catalyzed decomposition.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 12 Expand Image
    Western blot analysis of HeLa cell extracts (lane 1) or IKKα knock-out HeLa cells (lane 2), using IKKα (3G12) Mouse mAb #11930 (upper), or β-actin (13E5) Rabbit mAb #4970 (lower). The absence of signal in the knockout HeLa cells confirms specificity of the antibody for IKKα.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 13 Expand Image
    Western blot analysis of extracts from HeLa cells, untreated or treated with TNFa (#16789, 20 ng/mL, 10 min) and Calyculin A (#9902, 100 nM, 10 min); THP-1 cells differentiated with TPA (#4174, 80 nM for 16hr) untreated and treated with LPS (#14011, 1 μg/ml for 1hr) using #2697 (upper) or IKKα (D3W6N) Rabbit mAb #61294, IKKβ (D30C6) Rabbit mAb #8943 (middle), and β-Actin (D6A8) Rabbit mAb #8457 (lower).
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 14 Expand Image
    Western blot analysis of extracts from various cell lines using TRAF3 Antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 15 Expand Image
    CUT&RUN was performed with HDLM-2 cells and RelB (C1E4) Rabbit mAb, using CUT&RUN Assay Kit #86652. DNA Library was prepared using DNA Library Prep Kit for Illumina® (ChIP-seq, CUT&RUN) #56795. The figures show binding across chromosome 11 (upper), including BIRC3 gene (lower).
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 16 Expand Image
    Western blot analysis of extacts from HeLa cells, untransfected or transfected with HA-NIK, using NIK Antibody #4994.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 17 Expand Image
    Confocal immunofluorescent analysis of HCT 116 (high expression; left) and IGROV-1 (low expression; right) cells using IKKα (3G12) Mouse mAb (green). Blue pseudocolor = DRAQ5® #4084 (fluorescent DNA dye).
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 18 Expand Image
    Immunohistochemical analysis of paraffin-embedded human gall bladder (chronic cholecystitis), using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 19 Expand Image
    Immunoprecipitation of TRAF3 from HDLM-2 cell extracts. Lane 1 is Normal Rabbit IgG #2729, lane 2 is 10% input, and lane 3 is TRAF3 Antibody #4729. Western blot analysis was performed using TRAF3 Antibody #4729. Mouse Anti-rabbit (Conformation Specific) (L27A9) mAb (HRP Conjugate) #5127 was used as the secondary antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 20 Expand Image
    CUT&RUN was performed with HDLM-2 cells and either RelB (C1E4) Rabbit mAb or Rabbit (DA1E) mAb IgG XP® Isotype Control (CUT&RUN) #66362, using CUT&RUN Assay Kit #86652. The enriched DNA was quantified by real-time PCR using SimpleChIP® Human IκBα Promoter Primers #5552 and SimpleChIP® Human α Satellite Repeat Primers #4486. The amount of immunoprecipitated DNA in each sample is represented as signal relative to the total amount of input chromatin, which is equivalent to one.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 21 Expand Image
    Immunohistochemical analysis of paraffin-embedded human colon carcinoma, untreated (left) or λ phosphatase-treated (right), using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 22 Expand Image
    Immunohistochemical analysis of paraffin-embedded human colon carcinoma, showing cytoplasmic localization, using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 23 Expand Image
    Immunohistochemical analysis of paraffin-embedded human lung (chronic bronchitis), using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 24 Expand Image
    Immunohistochemical analysis of paraffin-embedded human breast carcinoma, using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb in the presence of control peptide (left) or Phospho-IKK-alpha/beta (Ser176/180) Blocking Peptide #1023 (right).
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 25 Expand Image
    Flow cytometric analysis of THP-1 cells, untreated (blue) and with TPA and LPS (green) using IKK-α (Ser176/Ser180) phosphate Rabbit mAb. Anti-rabbit IgG (H+L), F(ab')2 Fragment (PE Conjugate) #8885 was used as a secondary antibody.
    NF-κB Non-Canonical Pathway Antibody Sampler Kit: Image 26 Expand Image
    Western blot analysis of extracts from TNF-alpha and Calyculin A treated HeLa and NIH/3T3 cells, using Phospho-IKKα/β (Ser176/180) (16A6) Rabbit mAb.